STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103472996Si:ch1073-513e17.1. (503 aa)    
Predicted Functional Partners:
slc17a5
Solute carrier family 17 member 5.
  
  
 
0.903
LOC103472577
Uncharacterized protein.
   
 
 0.710
RIMS2
Regulating synaptic membrane exocytosis 2.
   
 
 0.710
snap25
Synaptosomal-associated protein; Belongs to the SNAP-25 family.
   
 0.500
rims1
Regulating synaptic membrane exocytosis 1a.
   
 
 0.469
LOC103472178
Regulating synaptic membrane exocytosis 3.
   
 
 0.469
LOC103467654
Synaptotagmin IIa.
   
 
 0.445
LOC103466664
Synaptotagmin Ib.
   
 
 0.445
SYT2
Synaptotagmin 2.
   
 
 0.445
LOC103481238
Synaptotagmin Vb.
   
 
 0.445
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.