STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPREP00000012349Amyloid beta (A4) precursor protein-binding, family B, member 2b. (451 aa)    
Predicted Functional Partners:
apbb2
Uncharacterized protein.
 
     0.924
ENSPREP00000002756
Uncharacterized protein.
 
     0.919
app
Amyloid beta (A4) precursor protein a.
    
 0.536
LOC103459816
Amyloid beta (A4) precursor protein b.
    
 0.536
mre11
Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing.
   
  0.508
LOC103469185
Adhesion G protein-coupled receptor L3.1; Belongs to the G-protein coupled receptor 2 family.
    
 
 0.482
rbm47
RNA binding motif protein 47.
      
 0.469
rad50
RAD50 homolog, double strand break repair protein.
   
 0.464
LOC103466132
CD44 molecule (Indian blood group) b.
   
 
 0.464
nuf2
UF2 component of NDC80 kinetochore complex.
   
 0.450
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
Server load: low (22%) [HD]