STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
srsf10RRM domain-containing protein. (187 aa)    
Predicted Functional Partners:
LOC103474154
Serine and arginine rich splicing factor 1a.
   
 0.965
LOC103475485
Uncharacterized protein.
   
 0.965
ENSPREP00000008610
RRM domain-containing protein.
   
 0.798
tra2b
Transformer 2 beta homolog.
   
0.798
ENSPREP00000027744
TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor.
   
 0.776
LOC103464577
RRM domain-containing protein.
   
0.771
SRSF3
Serine and arginine rich splicing factor 3.
   
0.771
LOC103473757
Serine and arginine rich splicing factor 9.
   
 0.756
srsf2
Serine and arginine rich splicing factor 2a.
   
0.748
srsf7
Serine and arginine rich splicing factor 7b.
   
0.746
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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