STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phospho1Phosphatase, orphan 1. (319 aa)    
Predicted Functional Partners:
pcyt2
Phosphate cytidylyltransferase 2, ethanolamine.
     
 0.916
PCYT2
Phosphate cytidylyltransferase 2, ethanolamine.
     
 0.916
pcyt1a
Phosphate cytidylyltransferase 1, choline, alpha a.
     
 0.912
pcyt1b
Phosphate cytidylyltransferase 1, choline, beta a.
     
 0.912
LOC103475428
Phosphate cytidylyltransferase 1, choline, beta b.
     
 0.912
LOC103466273
Choline kinase alpha.
     
 0.911
chkb
Choline kinase beta.
     
 0.911
ENSPREP00000033037
Uncharacterized protein.
  
  
 
0.903
LOC103481435
Carn_acyltransf domain-containing protein; Belongs to the carnitine/choline acetyltransferase family.
     
 0.902
chat
Choline O-acetyltransferase a; Belongs to the carnitine/choline acetyltransferase family.
     
 0.902
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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