STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
jarid2Jumonji, AT rich interactive domain 2b. (1446 aa)    
Predicted Functional Partners:
AEBP2
AE binding protein 2.
    
 0.992
aebp2
AE binding protein 2.
    
 0.992
eed
Embryonic ectoderm development.
   
 0.987
rbbp4
Retinoblastoma binding protein 4.
   
 0.969
LOC103468858
SUZ12 polycomb repressive complex 2 subunit b.
    
 0.967
LOC103469057
VEFS-Box domain-containing protein.
    
 0.967
ezh2
Enhancer of zeste 2 polycomb repressive complex 2 subunit.
   
 0.948
atp5f1d
ATP synthase F1 subunit delta.
  
 0.919
atp5f1c
ATP synthase subunit gamma.
  
 0.919
ATP6
ATP synthase subunit a.
  
 0.916
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.