STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cytipCytohesin 1 interacting protein. (357 aa)    
Predicted Functional Partners:
ift80
Intraflagellar transport 80 homolog (Chlamydomonas).
   
 0.580
ift57
Intraflagellar transport 57 homolog (Chlamydomonas).
    
 0.580
ift172
Intraflagellar transport 172.
    
 0.566
traf3ip1
TNF receptor-associated factor 3 interacting protein 1.
    
 0.561
ift88
Intraflagellar transport 88 homolog.
   
 0.556
LOC103475843
Calcium/calmodulin-dependent serine protein kinase b; Belongs to the MAGUK family.
    
 0.533
cask
Uncharacterized protein; Belongs to the MAGUK family.
    
 0.533
ttc26
Tetratricopeptide repeat domain 26.
   
 0.532
ift81
Intraflagellar transport 81 homolog.
    
 0.530
ift52
Intraflagellar transport 52 homolog (Chlamydomonas).
    
 0.525
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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