STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103465824Uncharacterized protein. (237 aa)    
Predicted Functional Partners:
LOC103464710
Troponin I type 1b (skeletal, slow).
 
 0.877
tnni1
Troponin I type 1a (skeletal, slow).
 
 0.873
ENSPREP00000002982
Troponin I2, fast skeletal type.
  
 0.841
TNNI2
Troponin I type 2b (skeletal, fast), tandem duplicate 1.
 
 0.837
ENSPREP00000004310
Uncharacterized protein.
  
 0.832
LOC103465821
Uncharacterized protein.
 
 0.832
LOC103465820
Troponin I4b, tandem duplicate 2.
 
 0.822
LOC103465822
Troponin I4b, tandem duplicate 2.
 
 0.822
LOC103459244
Uncharacterized protein.
 
 0.816
LOC103461533
Myosin, light chain 1, alkali; skeletal, fast.
   
 0.804
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.