STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tln2Talin 2b. (2552 aa)    
Predicted Functional Partners:
vcl
Vinculin b.
   
 0.986
LOC103476978
Vinculin a.
   
 0.986
LOC103477212
Uncharacterized protein; Belongs to the peptidase C2 family.
    
 0.905
ENSPREP00000008391
Uncharacterized protein.
    
 0.905
LOC103462596
Talin 2a.
  
  
 
0.900
itgb5
Integrin beta; Belongs to the integrin beta chain family.
   
 0.872
LOC103479472
Integrin beta; Belongs to the integrin beta chain family.
   
 0.866
itgb6
Integrin beta; Belongs to the integrin beta chain family.
   
 0.855
LOC103469372
Integrin beta; Belongs to the integrin beta chain family.
   
 0.854
itgb3
Integrin beta; Belongs to the integrin beta chain family.
   
 0.854
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.