STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mtdhMetadherin a. (519 aa)    
Predicted Functional Partners:
snd1
Staphylococcal nuclease domain-containing protein; Endonuclease that mediates miRNA decay of both protein-free and AGO2-loaded miRNAs.
    
 
 0.922
ints9
Integrator complex subunit 9.
    
 0.520
ints1
Integrator complex subunit 1.
    
 0.515
ints11
Integrator complex subunit 11.
    
 0.505
ENSPREP00000026079
Integrator complex subunit 4.
    
 0.497
ints7
Integrator complex subunit 7.
    
 0.490
ints3
Integrator complex subunit 3.
    
 0.490
ints13
Integrator complex subunit 13.
    
 0.488
bccip
Protein BCCIP homolog; Belongs to the BCP1 family.
    
 
 0.472
LOC103475007
Lysophosphatidic acid receptor 6a; Belongs to the G-protein coupled receptor 1 family.
      
 0.469
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.