STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
c2cd3C2 domain containing 3 centriole elongation regulator. (2177 aa)    
Predicted Functional Partners:
cep76
Centrosomal protein 76.
     
 0.644
ENSPREP00000015401
CENP-F_N domain-containing protein.
      
 0.614
cep41
Centrosomal protein 41.
     
 0.596
ofd1
OFD1 centriole and centriolar satellite protein.
    
 0.591
sclt1
Sodium channel and clathrin linker 1.
    
 0.568
ift88
Intraflagellar transport 88 homolog.
    
 
 0.553
cep83
Centrosomal protein 83.
     
 0.553
arl13b
ADP-ribosylation factor-like 13b.
      
 0.549
cep89
Centrosomal protein 89.
      
 0.545
rpgrip1l
RPGRIP1 like.
      
 0.533
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.