STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPREP00000012754Histone H2A; Belongs to the histone H2A family. (141 aa)    
Predicted Functional Partners:
mysm1
Myb-like, SWIRM and MPN domains 1.
    
 0.978
ENSPREP00000011248
Histone H2B; Belongs to the histone H2B family.
  
 0.811
ENSPREP00000012739
Histone H2B; Belongs to the histone H2B family.
 
 0.771
LOC103479695
Histone H2B; Belongs to the histone H2B family.
 
 0.770
ENSPREP00000007848
Histone H2B; Belongs to the histone H2B family.
 
 0.767
ENSPREP00000009448
Histone H2B; Belongs to the histone H2B family.
 
 0.765
smarca5
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5.
   
 0.750
uba52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
 0.742
LOC103475867
Lysine (K)-specific demethylase 6B, b.
    
 0.734
LOC103475798
Lysine (K)-specific demethylase 6A, like.
    
 0.734
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.