STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ppp1r16bProtein phosphatase 1, regulatory subunit 16B. (552 aa)    
Predicted Functional Partners:
ppp1cb
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
   
 0.759
PPP1CB
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
   
 0.759
LOC103468963
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
   
 0.729
ppp1cc
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
   
 0.729
LOC103481373
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
   
 0.729
dhx35
DEAH-box helicase 35.
   
 0.607
LOC103476193
Protein phosphatase 1, regulatory (inhibitor) subunit 14Aa.
     
 0.540
ppp1r7
Protein phosphatase 1, regulatory (inhibitor) subunit 7.
    
 0.535
rwdd1
RWD domain containing 1.
      
 0.533
rnf24
Ring finger protein 24.
      
 0.523
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.