STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103467073FCS-type domain-containing protein. (268 aa)    
Predicted Functional Partners:
rnf2
Ring finger protein 2.
    
 0.553
RING1
Ring finger protein 1.
    
 0.553
LOC103480967
Uncharacterized protein; Belongs to the peptidase S1 family.
   
 0.552
PCGF2
Polycomb group ring finger 2.
    
 0.540
ENSPREP00000022294
Bmi1 polycomb ring finger oncogene 1a.
    
 0.540
LOC103481889
Chromo domain-containing protein.
    
 0.510
cbx6
Chromobox homolog 6a.
    
 0.481
cbx8
Chromobox homolog 8b.
    
 0.481
SCMH1
Scm polycomb group protein homolog 1.
    
 0.481
LOC103469230
Chromobox homolog 8a (Pc class homolog, Drosophila).
    
 0.481
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.