STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rhpn1Rhophilin, Rho GTPase binding protein 1. (468 aa)    
Predicted Functional Partners:
LOC103460600
DnaJ heat shock protein family (Hsp40) member A3a.
 
      0.699
LOC103476138
Uncharacterized protein.
 
      0.649
LOC103468028
Charged multivesicular body protein 4Bb.
   
 0.580
chmp4c
Charged multivesicular body protein 4C.
   
 0.580
tm9sf1
Transmembrane 9 superfamily member; Belongs to the nonaspanin (TM9SF) (TC 9.A.2) family.
   
 0.580
LOC103464227
Uncharacterized protein.
   
 0.580
diaph2
Diaphanous-related formin 2.
 
  
  0.504
diaph3
Diaphanous-related formin 3.
 
  
  0.494
LOC103466155
UEV domain-containing protein.
    
 0.489
stam2
Signal transducing adaptor molecule (SH3 domain and ITAM motif) 2.
   
 
 0.481
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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