STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lfngBeta-1,3-N-acetylglucosaminyltransferase. (367 aa)    
Predicted Functional Partners:
LOC103473440
Notch receptor 1a.
    
 0.924
notch1
Notch receptor 1b.
    
 0.924
LOC103468742
Notch receptor 3.
    
 0.917
LOC103463625
Notch receptor 2.
    
 0.917
rfng
Beta-1,3-N-acetylglucosaminyltransferase.
  
  
 
0.902
nelfb
Negative elongation factor complex member B.
   
 0.724
polr2h
DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively.
    
  0.636
polr2f
Polymerase (RNA) II (DNA directed) polypeptide F.
    
 0.618
supt5h
Transcription elongation factor SPT5.
   
 0.583
supt4h1
SPT4 homolog, DSIF elongation factor subunit.
    
 0.581
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.