STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gpatch3G patch domain containing 3. (496 aa)    
Predicted Functional Partners:
LOC103462978
Uncharacterized protein.
   
    0.924
cdipt
CDP-diacylglycerol--inositol 3-phosphatidyltransferase.
      
 0.741
LOC103472164
Angiopoietin 2b.
   
  
 0.695
arl2bp
ADP-ribosylation factor-like 2 binding protein.
      
 0.549
rspry1
Ring finger and SPRY domain containing 1.
      
 0.549
efcab1
Uncharacterized protein.
      
 0.549
eaf1
EAF domain-containing protein.
      
 0.549
plekha8
Pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 8.
   
  
 0.530
aqp8
Uncharacterized protein; Belongs to the MIP/aquaporin (TC 1.A.8) family.
   
  
 0.504
ENSPREP00000006906
Olfactory receptor class A related 3.
      
 0.485
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.