STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rbm33RNA binding motif protein 33a. (1246 aa)    
Predicted Functional Partners:
fggy
FGGY carbohydrate kinase domain containing.
   
 0.572
USP24
Ubiquitin specific peptidase 24; Belongs to the peptidase C19 family.
   
 
 0.555
nom1
Nucleolar protein with MIF4G domain 1.
      
 0.524
aig1
Androgen-induced 1 (H. sapiens).
      
 0.469
dnajc21
DnaJ heat shock protein family (Hsp40) member C21.
      
 0.468
bcl7b
BAF chromatin remodeling complex subunit BCL7B b.
      
 0.437
tep1
Uncharacterized protein.
    
 0.427
zc3h14
Zinc finger CCCH-type containing 14.
    
 
 0.404
mrps25
Mitochondrial ribosomal protein S25.
    
 
 0.403
rcn2
Reticulocalbin 2.
    
 0.400
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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