STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
klhl18Kelch-like family member 18. (421 aa)    
Predicted Functional Partners:
nfe2l2
Nuclear factor, erythroid 2-like 2a.
    
 0.803
sqstm1
Sequestosome 1.
    
 0.786
LOC103479391
CULLIN_2 domain-containing protein; Belongs to the cullin family.
    
 0.751
LOC103474461
Cullin 3; Belongs to the cullin family.
    
 0.751
ENSPREP00000017127
GSAP-16 domain-containing protein.
    
 0.734
rbx1
Ring-box 1, E3 ubiquitin protein ligase.
    
 0.725
NFE2L1
Nuclear factor, erythroid 2 like 1.
    
 0.683
ENSPREP00000010125
BZIP domain-containing protein.
    
 0.668
bbs1
Bardet-Biedl syndrome 1.
    
 0.645
bbs9
Bardet-Biedl syndrome 9.
    
 0.641
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.