STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
bfsp2Beaded filament structural protein 2, phakinin; Belongs to the intermediate filament family. (285 aa)    
Predicted Functional Partners:
Unc79
Uncharacterized protein.
   
 0.782
BFSP1
Beaded filament structural protein 1; Belongs to the intermediate filament family.
   
 
 0.712
crybb1
Crystallin, beta B1; Belongs to the beta/gamma-crystallin family.
   
 0.686
cryba4
Crystallin, beta A4; Belongs to the beta/gamma-crystallin family.
   
  
 0.580
LOC103474533
Crystallin, beta A1a; Belongs to the beta/gamma-crystallin family.
   
  
 0.569
LOC103461037
RAN binding protein 2.
   
 0.540
LOC103469711
Crystallin beta B3; Belongs to the beta/gamma-crystallin family.
   
 0.475
crybb2
Crystallin, beta B2; Belongs to the beta/gamma-crystallin family.
      
 0.469
rbbp5
Retinoblastoma binding protein 5.
    
 0.465
ash2l
Ash2 like, histone lysine methyltransferase complex subunit.
    
 0.461
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.