STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SRSF11Serine and arginine rich splicing factor 11. (453 aa)    
Predicted Functional Partners:
srsf2
Serine and arginine rich splicing factor 2a.
   
 0.764
srrm1
Serine/arginine repetitive matrix 1.
   
 0.725
pnisr
Uncharacterized protein.
   
 
 0.692
rnps1
RNA binding protein S1, serine-rich domain.
   
 0.678
srsf10
RRM domain-containing protein.
   
 0.670
pabpn1
Poly(A) binding protein, nuclear 1.
   
 0.662
LOC103464577
RRM domain-containing protein.
   
 0.660
SRSF3
Serine and arginine rich splicing factor 3.
   
 0.660
LOC103473757
Serine and arginine rich splicing factor 9.
   
 0.652
cdc40
Cell division cycle 40 homolog (S. cerevisiae).
     
 0.642
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.