STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPREP00000013399Uncharacterized protein. (453 aa)    
Predicted Functional Partners:
LOC103464847
Ig-like domain-containing protein.
     
  0.900
LOC103477977
Uncharacterized protein.
     
 0.738
LOC103457799
Uncharacterized protein.
     
 0.703
LOC103478004
Uncharacterized protein.
     
 0.645
LOC103474821
Uncharacterized protein.
   
 
 0.626
ENSPREP00000024881
IGv domain-containing protein.
   
 
 0.584
LOC103467688
Tumor necrosis factor receptor superfamily, member 9a.
   
  
 0.572
ENSPREP00000025426
NACHT domain-containing protein.
  
  
 0.570
ptpn6
Protein tyrosine phosphatase non-receptor type 6.
   
 0.569
LOC103467098
Tyrosine-protein phosphatase non-receptor type; Belongs to the protein-tyrosine phosphatase family. Non- receptor class 2 subfamily.
   
 0.569
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
Server load: low (28%) [HD]