Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ENSPREP00000013441 | LOC103471319 | ENSPREP00000013441 | ENSPREP00000002619 | Uncharacterized protein. | Bicaudal C homolog 2. | 0.416 |
ENSPREP00000013441 | Lin28a | ENSPREP00000013441 | ENSPREP00000007670 | Uncharacterized protein. | CCHC-type domain-containing protein. | 0.410 |
ENSPREP00000013441 | TUT7 | ENSPREP00000013441 | ENSPREP00000013423 | Uncharacterized protein. | Terminal uridylyl transferase 7. | 0.899 |
ENSPREP00000013441 | Zcchc6 | ENSPREP00000013441 | ENSPREP00000013451 | Uncharacterized protein. | Uncharacterized protein. | 0.892 |
ENSPREP00000013441 | bicc1 | ENSPREP00000013441 | ENSPREP00000016029 | Uncharacterized protein. | BicC family RNA binding protein 1a. | 0.416 |
ENSPREP00000013441 | dis3l2 | ENSPREP00000013441 | ENSPREP00000003433 | Uncharacterized protein. | DIS3-like exonuclease 2; 3'-5'-exoribonuclease that specifically recognizes RNAs polyuridylated at their 3' end and mediates their degradation. Component of an exosome-independent RNA degradation pathway that mediates degradation of both mRNAs and miRNAs that have been polyuridylated by a terminal uridylyltransferase. Essential for correct mitosis, and negatively regulates cell proliferation. Belongs to the RNR ribonuclease family. DIS3L2 subfamily. | 0.451 |
ENSPREP00000013441 | eif4a3 | ENSPREP00000013441 | ENSPREP00000008805 | Uncharacterized protein. | Eukaryotic translation initiation factor 4A3; Belongs to the DEAD box helicase family. | 0.411 |
ENSPREP00000013441 | sart3 | ENSPREP00000013441 | ENSPREP00000032594 | Uncharacterized protein. | Spliceosome associated factor 3, U4/U6 recycling protein. | 0.407 |
LOC103471319 | ENSPREP00000013441 | ENSPREP00000002619 | ENSPREP00000013441 | Bicaudal C homolog 2. | Uncharacterized protein. | 0.416 |
LOC103471319 | TUT7 | ENSPREP00000002619 | ENSPREP00000013423 | Bicaudal C homolog 2. | Terminal uridylyl transferase 7. | 0.416 |
LOC103471319 | Zcchc6 | ENSPREP00000002619 | ENSPREP00000013451 | Bicaudal C homolog 2. | Uncharacterized protein. | 0.416 |
Lin28a | ENSPREP00000013441 | ENSPREP00000007670 | ENSPREP00000013441 | CCHC-type domain-containing protein. | Uncharacterized protein. | 0.410 |
Lin28a | TUT7 | ENSPREP00000007670 | ENSPREP00000013423 | CCHC-type domain-containing protein. | Terminal uridylyl transferase 7. | 0.410 |
Lin28a | Zcchc6 | ENSPREP00000007670 | ENSPREP00000013451 | CCHC-type domain-containing protein. | Uncharacterized protein. | 0.410 |
Lin28a | dis3l2 | ENSPREP00000007670 | ENSPREP00000003433 | CCHC-type domain-containing protein. | DIS3-like exonuclease 2; 3'-5'-exoribonuclease that specifically recognizes RNAs polyuridylated at their 3' end and mediates their degradation. Component of an exosome-independent RNA degradation pathway that mediates degradation of both mRNAs and miRNAs that have been polyuridylated by a terminal uridylyltransferase. Essential for correct mitosis, and negatively regulates cell proliferation. Belongs to the RNR ribonuclease family. DIS3L2 subfamily. | 0.471 |
TUT7 | ENSPREP00000013441 | ENSPREP00000013423 | ENSPREP00000013441 | Terminal uridylyl transferase 7. | Uncharacterized protein. | 0.899 |
TUT7 | LOC103471319 | ENSPREP00000013423 | ENSPREP00000002619 | Terminal uridylyl transferase 7. | Bicaudal C homolog 2. | 0.416 |
TUT7 | Lin28a | ENSPREP00000013423 | ENSPREP00000007670 | Terminal uridylyl transferase 7. | CCHC-type domain-containing protein. | 0.410 |
TUT7 | Zcchc6 | ENSPREP00000013423 | ENSPREP00000013451 | Terminal uridylyl transferase 7. | Uncharacterized protein. | 0.890 |
TUT7 | bicc1 | ENSPREP00000013423 | ENSPREP00000016029 | Terminal uridylyl transferase 7. | BicC family RNA binding protein 1a. | 0.416 |
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