STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103480562Sodium/hydrogen exchanger; Belongs to the monovalent cation:proton antiporter 1 (CPA1) transporter (TC 2.A.36) family. (800 aa)    
Predicted Functional Partners:
chp1
Calcineurin-like EF-hand protein 1.
   
 0.782
LOC103460026
Calcineurin-like EF-hand protein 2.
   
 0.675
tmem121
Transmembrane protein 121Ab.
      
 0.597
atp1a3
Sodium/potassium-transporting ATPase subunit alpha.
   
 
 0.594
LOC103472959
Sodium/potassium-transporting ATPase subunit alpha.
   
 
 0.583
tesc
Tescalcin a.
   
 0.567
LOC103473749
Tescalcin b.
   
 0.567
ppp3r1
Uncharacterized protein.
   
 0.563
LOC103472014
Uncharacterized protein.
   
 0.563
LOC103479499
Sodium/potassium-transporting ATPase subunit alpha.
   
 
 0.517
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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