STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
morn5MORN repeat containing 5. (177 aa)    
Predicted Functional Partners:
morn3
MORN repeat containing 3.
   
  
 0.633
efcab1
Uncharacterized protein.
   
   0.620
LOC103474679
RAB guanine nucleotide exchange factor (GEF) 1, like.
    
 0.563
RABGEF1
RAB guanine nucleotide exchange factor 1.
    
 0.563
LOC103470250
Uncharacterized protein.
    
 0.563
mns1
Meiosis-specific nuclear structural 1.
    
 
 0.507
LOC103476913
MORN repeat containing 4.
      
0.471
LOC103470129
Uncharacterized protein.
      
 0.471
dnali1
Dynein, axonemal, light intermediate chain 1.
   
 
 0.447
cfap161
Uncharacterized protein.
   
  
 0.431
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.