STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103470577Cytochrome P450, family 1, subfamily D, polypeptide 1; Belongs to the cytochrome P450 family. (535 aa)    
Predicted Functional Partners:
aromatase
Uncharacterized protein; Belongs to the cytochrome P450 family.
  
 0.633
aasdh
Aminoadipate-semialdehyde dehydrogenase.
  
 0.571
LOC103460470
Cytochrome P450, family 7, subfamily B, polypeptide 1; Belongs to the cytochrome P450 family.
  
   
 0.547
LOC103474609
Cytochrome P450, family 4, subfamily F, polypeptide 3; Belongs to the cytochrome P450 family.
  
0.535
ndufab1
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
  
 0.529
nbn
Nibrin.
    
 0.519
LOC103461467
Cytochrome P450, family 3, subfamily A, polypeptide 65.
   
 0.518
bard1
BRCA1 associated RING domain 1.
    
 0.509
LOC103478724
Aryl hydrocarbon receptor nuclear translocator.
    
 0.503
LOC103457584
Aryl hydrocarbon receptor 2.
   
 0.502
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.