STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
acad11Acyl-CoA dehydrogenase family, member 11. (758 aa)    
Predicted Functional Partners:
ubxn7
UBX domain protein 7.
    
   0.988
hadh
Hydroxyacyl-CoA dehydrogenase.
  
 
 0.907
hsdl2
Hydroxysteroid dehydrogenase like 2.
  
 0.905
cryl1
Crystallin, lambda 1.
  
 
 0.904
ENSPREP00000000563
Methylthioribose-1-phosphate isomerase 1; Belongs to the eIF-2B alpha/beta/delta subunits family.
  
 
  0.878
nsfl1c
NSFL1 (p97) cofactor (p47).
    
   0.872
hacl1
2-hydroxyacyl-CoA lyase 1; Belongs to the TPP enzyme family.
  
 0.871
ilvbl
IlvB (bacterial acetolactate synthase)-like; Belongs to the TPP enzyme family.
  
 0.870
lsg1
Large 60S subunit nuclear export GTPase 1.
 
      0.828
rpp14
Ribonuclease P/MRP 14 subunit.
  
 0.824
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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