STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mfsd3Major facilitator superfamily domain containing 3. (419 aa)    
Predicted Functional Partners:
ak9
Adenylate kinase 9.
      
 0.549
mfsd5
Major facilitator superfamily domain containing 5.
      
 0.477
mfsd13a
Major facilitator superfamily domain containing 13A.
      
 0.473
mfsd11
Major facilitator superfamily domain containing 11.
      
 0.471
Rtn4r
Reticulon 4 receptor.
      
 0.467
mfsd6l
Major facilitator superfamily domain containing 6-like.
      
 0.463
LOC103473156
Actin related protein 1, centractin.
    
 
 0.443
mfsd2b
Major facilitator superfamily domain containing 2B.
      
 0.440
mfsd14a
Hippocampus abundant transcript 1a.
   
  
 0.439
LOC103470769
Si:ch211-87m7.2.
   
  
 0.439
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.