STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cenplCentromere protein L. (351 aa)    
Predicted Functional Partners:
cenpi
Centromere protein I.
   
 0.982
cenpn
Centromere protein N.
   
 0.980
cenpm
Proliferation associated nuclear element.
    
 0.979
ENSPREP00000000618
Centromere protein K.
   
 0.967
ENSPREP00000032241
Uncharacterized protein.
    
 0.963
cenpx
Centromere protein X.
    
 0.910
cenpw
Uncharacterized protein.
    
 0.903
LOC103461041
Caspase 3, apoptosis-related cysteine peptidase a; Belongs to the peptidase C14A family.
   
 0.768
CASP3
Caspase 3; Belongs to the peptidase C14A family.
   
 0.768
LOC103473137
Uncharacterized protein; Belongs to the peptidase C14A family.
   
 0.768
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.