STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103480580Junctional adhesion molecule 2b. (267 aa)    
Predicted Functional Partners:
jam3
Junctional adhesion molecule 3a.
   
 
0.902
LOC103476216
Junctional adhesion molecule 3b.
   
 
0.902
LOC103466442
Tight junction protein 1b; Belongs to the MAGUK family.
     
 0.902
LOC103462420
Tight junction protein 1a; Belongs to the MAGUK family.
     
 0.902
itgb1
Integrin beta; Belongs to the integrin beta chain family.
     
  0.900
PARD3
Par-3 family cell polarity regulator.
    
  0.900
pard3
Par-3 family cell polarity regulator alpha, b.
    
  0.900
LOC103479472
Integrin beta; Belongs to the integrin beta chain family.
     
  0.900
LOC103475799
F11 receptor, tandem duplicate 1.
     
0.900
LOC103471829
Info leucine-rich repeat, immunoglobulin-like and transmembrane domains 3a.
    
 0.489
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.