STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Chst2Sulfotransferase; Belongs to the sulfotransferase 1 family. (457 aa)    
Predicted Functional Partners:
CHST8
Carbohydrate sulfotransferase.
      
 0.852
LOC103482125
Acyl-CoA binding domain containing 4.
      
 0.839
depdc4
Si:ch211-265o23.1.
      
 0.810
pald1
Phosphatase domain containing paladin 1a.
      
 0.665
tcp11
Uncharacterized protein.
      
 0.635
ntan1
Uncharacterized protein.
      
 0.549
ENSPREP00000025039
Carbohydrate sulfotransferase.
      
 0.548
lum
Lumican.
     
 0.520
LOC103459205
Keratocan.
     
 0.476
alg12
Mannosyltransferase.
      
 0.470
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.