STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
slc66a1Solute carrier family 66 member 1. (317 aa)    
Predicted Functional Partners:
ctns
Cystinosin, lysosomal cystine transporter.
   
 
 0.650
ebna1bp2
EBNA1 binding protein 2.
      
 0.547
mrto4
Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes.
      
 0.523
dus2
Dihydrouridine synthase 2.
 
      0.511
zswim2
Zinc finger, SWIM-type containing 2.
      
 0.469
elp2
Elongator acetyltransferase complex subunit 2.
     
 0.446
slc38a7
Solute carrier family 38 member 7.
      
 0.438
LOC103471674
Solute carrier family 36 member 1.
      
 0.433
slc38a9
Solute carrier family 38 member 9.
      
 0.428
LOC103469256
Tectonin beta-propeller repeat containing 1b.
      
 0.414
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.