STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FUNDC1FUN14 domain containing 1. (154 aa)    
Predicted Functional Partners:
gabarapl2
GABA(A) receptor-associated protein like 2.
   
 0.962
gabarap
GABA(A) receptor-associated protein b.
   
 0.962
LOC103478027
Zgc:92606.
    
 0.958
ulk1
Unc-51 like autophagy activating kinase 1.
    
 0.957
LOC103472902
Casein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family.
     
 0.956
LOC103478541
Casein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family.
     
 0.956
LOC103478532
Zgc:86598; Belongs to the protein kinase superfamily.
   
 
 0.945
LOC103465502
Casein kinase 2, alpha 4 polypeptide; Belongs to the protein kinase superfamily.
   
 
 0.945
SRC
Tyrosine-protein kinase.
    
 0.940
LOC103467856
Tyrosine-protein kinase.
    
 0.940
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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