Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| LOC103459897 | LOC103466495 | ENSPREP00000005116 | ENSPREP00000019706 | Rab proteins geranylgeranyltransferase component A; Substrate-binding subunit (component A) of the Rab geranylgeranyltransferase (GGTase) complex. Binds unprenylated Rab proteins and presents the substrate peptide to the catalytic component B. The component A is thought to be regenerated by transferring its prenylated Rab back to the donor membrane. | RAB3A interacting protein (rabin3)-like 1. | 0.524 |
| LOC103459897 | rab39b | ENSPREP00000005116 | ENSPREP00000014123 | Rab proteins geranylgeranyltransferase component A; Substrate-binding subunit (component A) of the Rab geranylgeranyltransferase (GGTase) complex. Binds unprenylated Rab proteins and presents the substrate peptide to the catalytic component B. The component A is thought to be regenerated by transferring its prenylated Rab back to the donor membrane. | Uncharacterized protein. | 0.565 |
| LOC103459897 | rab3ip | ENSPREP00000005116 | ENSPREP00000032267 | Rab proteins geranylgeranyltransferase component A; Substrate-binding subunit (component A) of the Rab geranylgeranyltransferase (GGTase) complex. Binds unprenylated Rab proteins and presents the substrate peptide to the catalytic component B. The component A is thought to be regenerated by transferring its prenylated Rab back to the donor membrane. | RAB3A interacting protein (rabin3). | 0.524 |
| LOC103466495 | LOC103459897 | ENSPREP00000019706 | ENSPREP00000005116 | RAB3A interacting protein (rabin3)-like 1. | Rab proteins geranylgeranyltransferase component A; Substrate-binding subunit (component A) of the Rab geranylgeranyltransferase (GGTase) complex. Binds unprenylated Rab proteins and presents the substrate peptide to the catalytic component B. The component A is thought to be regenerated by transferring its prenylated Rab back to the donor membrane. | 0.524 |
| LOC103466495 | exoc1 | ENSPREP00000019706 | ENSPREP00000029550 | RAB3A interacting protein (rabin3)-like 1. | Exocyst complex component 1. | 0.792 |
| LOC103466495 | exoc2 | ENSPREP00000019706 | ENSPREP00000014613 | RAB3A interacting protein (rabin3)-like 1. | Exocyst complex component 2; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane. Belongs to the SEC5 family. | 0.795 |
| LOC103466495 | exoc4 | ENSPREP00000019706 | ENSPREP00000005337 | RAB3A interacting protein (rabin3)-like 1. | Exocyst complex component 4. | 0.806 |
| LOC103466495 | rab39b | ENSPREP00000019706 | ENSPREP00000014123 | RAB3A interacting protein (rabin3)-like 1. | Uncharacterized protein. | 0.564 |
| c9orf72 | rab39b | ENSPREP00000003323 | ENSPREP00000014123 | Zgc:100846. | Uncharacterized protein. | 0.907 |
| c9orf72 | smcr8 | ENSPREP00000003323 | ENSPREP00000026802 | Zgc:100846. | Smith-Magenis syndrome chromosome region, candidate 8a. | 0.986 |
| c9orf72 | sqstm1 | ENSPREP00000003323 | ENSPREP00000016733 | Zgc:100846. | Sequestosome 1. | 0.526 |
| c9orf72 | wdr41 | ENSPREP00000003323 | ENSPREP00000027833 | Zgc:100846. | WD repeat domain 41. | 0.991 |
| exoc1 | LOC103466495 | ENSPREP00000029550 | ENSPREP00000019706 | Exocyst complex component 1. | RAB3A interacting protein (rabin3)-like 1. | 0.792 |
| exoc1 | exoc2 | ENSPREP00000029550 | ENSPREP00000014613 | Exocyst complex component 1. | Exocyst complex component 2; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane. Belongs to the SEC5 family. | 0.999 |
| exoc1 | exoc4 | ENSPREP00000029550 | ENSPREP00000005337 | Exocyst complex component 1. | Exocyst complex component 4. | 0.999 |
| exoc1 | rab39b | ENSPREP00000029550 | ENSPREP00000014123 | Exocyst complex component 1. | Uncharacterized protein. | 0.579 |
| exoc1 | rab3ip | ENSPREP00000029550 | ENSPREP00000032267 | Exocyst complex component 1. | RAB3A interacting protein (rabin3). | 0.792 |
| exoc2 | LOC103466495 | ENSPREP00000014613 | ENSPREP00000019706 | Exocyst complex component 2; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane. Belongs to the SEC5 family. | RAB3A interacting protein (rabin3)-like 1. | 0.795 |
| exoc2 | exoc1 | ENSPREP00000014613 | ENSPREP00000029550 | Exocyst complex component 2; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane. Belongs to the SEC5 family. | Exocyst complex component 1. | 0.999 |
| exoc2 | exoc4 | ENSPREP00000014613 | ENSPREP00000005337 | Exocyst complex component 2; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane. Belongs to the SEC5 family. | Exocyst complex component 4. | 0.999 |
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