STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103471620Inositol polyphosphate phosphatase-like 1b. (1151 aa)    
Predicted Functional Partners:
shc1
SHC (Src homology 2 domain containing) transforming protein 1.
    
 0.856
SHC3
SHC adaptor protein 3.
    
 0.856
shc2
SHC (Src homology 2 domain containing) transforming protein 2.
    
 0.834
gak
Cyclin G associated kinase.
   
 
 0.736
synj1
Synaptojanin 1.
    
0.736
grb2
Growth factor receptor-bound protein 2b.
   
0.736
ptpn6
Protein tyrosine phosphatase non-receptor type 6.
   
 0.726
LOC103467098
Tyrosine-protein phosphatase non-receptor type; Belongs to the protein-tyrosine phosphatase family. Non- receptor class 2 subfamily.
   
 0.726
ptpn11
Tyrosine-protein phosphatase non-receptor type; Belongs to the protein-tyrosine phosphatase family. Non- receptor class 2 subfamily.
   
 0.726
LOC103464524
Eph receptor A2 a.
    
 0.715
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.