STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cxadrCXADR Ig-like cell adhesion molecule. (382 aa)    
Predicted Functional Partners:
LOC103474422
Sodium channel, voltage-gated, type II, beta.
    
  0.701
apaf1
Apoptotic peptidase activating factor 1.
    
 0.694
appl1
Adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 1.
    
 0.629
appl2
Adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 2.
    
 0.629
Birc6
UBIQUITIN_CONJUGAT_2 domain-containing protein.
   
 0.613
epcam
Epithelial cell adhesion molecule.
   
  
 0.550
mib2
Mindbomb E3 ubiquitin protein ligase 2.
    
 0.528
LOC103473229
Occludin a.
   
 0.499
dffb
DNA fragmentation factor, beta polypeptide (caspase-activated DNase).
    
 0.492
cenpn
Centromere protein N.
   
 0.485
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.