STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ripk4Receptor-interacting serine-threonine kinase 4. (886 aa)    
Predicted Functional Partners:
ENSPREP00000027150
Uncharacterized protein.
   
 0.891
Birc6
UBIQUITIN_CONJUGAT_2 domain-containing protein.
   
 0.828
Katnal2
Katanin p60 subunit A-like 2.
   
 0.799
mib2
Mindbomb E3 ubiquitin protein ligase 2.
   
0.794
uba52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
   
 0.769
tradd
Tnfrsf1a-associated via death domain.
    
 0.763
gak
Cyclin G associated kinase.
   
0.760
rps27a
Ribosomal protein S27a.
    
 0.759
traf7
TNF receptor-associated factor 7.
   
 0.758
habp2
Uncharacterized protein.
   
 0.733
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.