STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103479199IFI30 lysosomal thiol reductase. (251 aa)    
Predicted Functional Partners:
wars1
Tryptophanyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
   
  
 0.610
cd74
CD74 molecule, major histocompatibility complex, class II invariant chain a.
   
  
 0.602
ENSPREP00000027150
Uncharacterized protein.
    
   0.599
ENSPREP00000008622
Protein disulfide isomerase family A, member 3.
      
 0.597
auts2
Activator of transcription and developmental regulator AUTS2 a.
      
 0.469
mif
Macrophage migration inhibitory factor.
      
 0.453
ENSPREP00000033529
Uncharacterized protein.
   
   0.438
stat1
Signal transducer and activator of transcription.
   
 
 0.435
Clg6h15orf65
Uncharacterized protein.
    
   0.434
efhb
Uncharacterized protein.
    
   0.434
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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