STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103469400Serine/threonine kinase 17a like; Belongs to the protein kinase superfamily. (363 aa)    
Predicted Functional Partners:
ENSPREP00000027539
Uncharacterized protein.
 
  
   0.888
ENSPREP00000027477
Uncharacterized protein.
 
  
   0.879
ENSPREP00000025971
Uncharacterized protein.
 
  
   0.794
ENSPREP00000027601
Uncharacterized protein.
 
  
   0.776
ENSPREP00000026351
Uncharacterized protein.
 
  
   0.715
Kalrn
Kalirin RhoGEF kinase a.
 
  
   0.707
ENSPREP00000026229
Uncharacterized protein.
 
  
   0.638
ENSPREP00000027384
Uncharacterized protein.
 
  
   0.613
Trio
Trio Rho guanine nucleotide exchange factor a.
 
  
   0.546
ENSPREP00000033113
Uncharacterized protein.
 
  
   0.532
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.