STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPREP00000014653Mitochondrial ribosomal protein L39. (316 aa)    
Predicted Functional Partners:
mrps31
Mitochondrial ribosomal protein S31.
   
 
 0.964
mrpl1
Mitochondrial ribosomal protein L1.
   
 
 0.959
mrpl22
Mitochondrial ribosomal protein L22; Belongs to the universal ribosomal protein uL22 family.
   
 
 0.957
mrpl12
Mitochondrial ribosomal protein L12.
   
 
 0.945
mrpl3
Mitochondrial ribosomal protein L3; Belongs to the universal ribosomal protein uL3 family.
   
 
 0.944
mrpl30
Mitochondrial ribosomal protein L30.
   
 
 0.941
mrps9
Mitochondrial ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family.
  
 
 0.940
mrpl16
Mitochondrial ribosomal protein L16.
   
 0.940
mrpl13
Mitochondrial ribosomal protein L13.
  
 
 0.937
mrpl32
Mitochondrial ribosomal protein L32.
  
   0.937
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.