STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPREP00000014727Dynein light chain. (76 aa)    
Predicted Functional Partners:
DYNC1I1
Dynein cytoplasmic 1 intermediate chain 1.
   
 0.796
LOC103458526
Dynein, cytoplasmic 1, intermediate chain 2a.
   
 0.796
LOC103479324
Dynein, cytoplasmic 1, intermediate chain 2b.
   
 0.796
nup214
Nup214_FG domain-containing protein.
    
 
 0.785
Bcl2l11
Uncharacterized protein.
    
 0.784
wdr60
WD repeat domain 60.
    
 0.780
DYNLRB2
Dynein light chain roadblock.
   
 0.740
DYNLRB1
Dynein light chain roadblock-type 1.
   
 0.740
ENSPREP00000032211
Robl_LC7 domain-containing protein.
   
 0.740
dync2li1
Dynein, cytoplasmic 2, light intermediate chain 1.
    
 0.727
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.