STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dll1Delta-like protein; Putative Notch ligand involved in the mediation of Notch signaling. (813 aa)    
Predicted Functional Partners:
LOC103473440
Notch receptor 1a.
   
0.887
notch1
Notch receptor 1b.
   
0.887
LOC103468742
Notch receptor 3.
    
0.786
LOC103463625
Notch receptor 2.
    
0.786
LOC103474847
NUMB like endocytic adaptor protein.
   
 0.519
LOC103469257
Recombination signal binding protein for immunoglobulin kappa J region a.
    
 0.504
rbpj
Recombination signal binding protein for immunoglobulin kappa J region.
    
 0.504
LOC103457457
Uncharacterized protein.
      
 0.477
nkd1
NKD inhibitor of WNT signaling pathway 1.
      
 0.477
Mib1
Mindbomb E3 ubiquitin protein ligase 1.
   
 0.429
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.