STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mis12MIS12 kinetochore complex component. (231 aa)    
Predicted Functional Partners:
spc24
SPC24 component of NDC80 kinetochore complex.
   
 0.971
nsl1
NSL1 component of MIS12 kinetochore complex.
    
 0.967
LOC103471364
Si:dkey-6i22.5.
    
 0.962
ndc80
NDC80 kinetochore complex component.
   
 0.959
spc25
SPC25 component of NDC80 kinetochore complex.
    
 0.954
nuf2
UF2 component of NDC80 kinetochore complex.
   
 0.942
LOC103469459
Uncharacterized protein.
    
 
 0.915
bub1b
BUB1 mitotic checkpoint serine/threonine kinase Bb.
    
 0.836
Bub1
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
    
 0.751
ENSPREP00000021048
BUB1 N-terminal domain-containing protein.
    
 0.751
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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