STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gmdsGDP-mannose 4,6-dehydratase. (341 aa)    
Predicted Functional Partners:
tsta3
Tissue specific transplantation antigen P35B.
 0.994
gmppb
GDP-mannose pyrophosphorylase B.
    
 0.922
gmppa
GDP-mannose pyrophosphorylase Ab.
    
 0.777
gale
UDP-glucose 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family.
    
 0.751
eif2b3
Eukaryotic translation initiation factor 2B, subunit 3 gamma.
    
 0.736
LOC103460701
Zgc:136439.
    
 0.736
eif2b5
Eukaryotic translation initiation factor 2B, subunit 5 epsilon.
    
 0.736
h6pd
Hexose-6-phosphate dehydrogenase (glucose 1-dehydrogenase).
     
 0.719
ugdh
UDP-glucose 6-dehydrogenase; Involved in the biosynthesis of glycosaminoglycans; hyaluronan, chondroitin sulfate, and heparan sulfate. Belongs to the UDP-glucose/GDP-mannose dehydrogenase family.
  
  
 0.706
mpi
Mannose phosphate isomerase.
     
 0.703
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.