STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103467010Cyclin-dependent kinase 11B. (837 aa)    
Predicted Functional Partners:
ccnl1
Cyclin L1a; Belongs to the cyclin family.
   
 
 0.668
ccnc
Cyclin C; Belongs to the cyclin family.
     
 0.643
cenpj
Centromere protein J.
   
 0.590
haus8
Uncharacterized protein.
     
 0.587
cep135
Centrosomal protein 135.
    
 0.586
cep63
Centrosomal protein 63.
     
 0.569
cep78
Centrosomal protein 78.
     
 0.561
mapre1
Microtubule-associated protein, RP/EB family, member 1b.
   
 
  0.560
ENSPREP00000030871
Uncharacterized protein.
   
  
 0.559
cep131
Centrosomal protein 131.
     
 0.557
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.