STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103463604Acyl-CoA thioesterase 11b. (603 aa)    
Predicted Functional Partners:
etfa
Electron transfer flavoprotein subunit alpha.
    
 0.697
grk4
G protein-coupled receptor kinase; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. GPRK subfamily.
      
 0.681
rttn
Rotatin.
      
 0.681
Cwc25
Cir_N domain-containing protein.
   
    0.632
clg11h1orf109
C19h1orf109 homolog (H. sapiens).
   
    0.632
rubcnl
Rubicon like autophagy enhancer.
   
    0.632
ENSPREP00000010030
Electron transfer flavoprotein subunit beta.
    
  0.631
LOC103478140
Thioesterase superfamily member 4.
     
 0.610
hadh
Hydroxyacyl-CoA dehydrogenase.
  
 
 0.592
cryl1
Crystallin, lambda 1.
  
 
 0.591
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.