STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPREP00000014932Forkhead box C1. (275 aa)    
Predicted Functional Partners:
hoxa5
Homeobox A5a.
    
 0.446
Fgf20
Fibroblast growth factor; Belongs to the heparin-binding growth factors family.
   
 
 0.428
mib2
Mindbomb E3 ubiquitin protein ligase 2.
   
 0.424
LOC103459837
Fork-head domain-containing protein.
  
0.419
farsb
Phenylalanyl-tRNA synthetase subunit beta; Belongs to the EF-1-beta/EF-1-delta family.
   
  
 0.418
FGFRL1
Fibroblast growth factor receptor like 1.
    
 
 0.411
srpk1
SRSF protein kinase 1a.
    
 
 0.411
LOC103477293
Fibroblast growth factor receptor.
    
 
 0.410
nfatc2
Nuclear factor of activated T cells 2a.
   
  
 0.410
ENSPREP00000017737
Uncharacterized protein.
    
 0.405
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.