STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ppt1Palmitoyl-protein thioesterase 1 (ceroid-lipofuscinosis, neuronal 1, infantile). (388 aa)    
Predicted Functional Partners:
ppt2
Palmitoyl-protein thioesterase 2.
     
0.911
LOC103477738
Zgc:66024.
     
0.911
mecr
Mitochondrial trans-2-enoyl-CoA reductase.
   
 
 0.904
acsl3
Uncharacterized protein.
   
 
 0.677
LOC103479395
Acyl-CoA synthetase long chain family member 3b.
   
 
 0.677
LOC103470977
Acyl-CoA synthetase long chain family member 4a.
   
 
 0.677
ACSL1
Acyl-CoA synthetase long chain family member 1.
   
 
 0.662
LOC103475331
AMP-binding domain-containing protein.
   
 
 0.662
acsl1
Acyl-CoA synthetase long chain family member 1a.
   
 
 0.662
LOC103470507
Acyl-CoA synthetase long chain family member 2.
   
 
 0.662
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
Server load: low (18%) [HD]