STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
aspnAsporin. (371 aa)    
Predicted Functional Partners:
ogn
Osteoglycin, paralog a.
   
 
0.729
ENSPREP00000023466
Uncharacterized protein.
   
 
 0.729
lum
Lumican.
 
 
0.697
LOC103467543
Fibromodulin b.
  
 
0.661
LOC103464866
Fibromodulin a.
  
 
0.659
LOC103459205
Keratocan.
  
 
0.619
hspg2
Heparan sulfate proteoglycan 2.
   
 0.605
prelp
Proline/arginine-rich end leucine-rich repeat protein.
  
 
0.600
LOC103459210
Decorin; May affect the rate of fibrils formation.
  
 
0.580
acan
Aggrecan b.
   
 
 0.576
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.