STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
spata4Spermatogenesis associated 4. (208 aa)    
Predicted Functional Partners:
ENSPREP00000027150
Uncharacterized protein.
    
   0.763
spata17
Spermatogenesis associated 17.
   
  
 0.727
spag6
Sperm associated antigen 6.
  
  
 0.661
pgk1
Phosphoglycerate kinase.
   
 
 0.598
mycbpap
Mycbp associated protein.
   
 
 0.566
klhdc3
Kelch domain containing 3.
      
 0.549
tfap2d
Transcription factor AP-2 delta (activating enhancer binding protein 2 delta).
      
 0.549
agpat5
1-acylglycerol-3-phosphate O-acyltransferase 5 (lysophosphatidic acid acyltransferase, epsilon).
      
 0.549
blmh
Bleomycin hydrolase; Belongs to the peptidase C1 family.
      
 0.532
spata20
Spermatogenesis associated 20.
      
 0.523
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.