STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DCAF7DDB1 and CUL4 associated factor 7. (342 aa)    
Predicted Functional Partners:
LOC103474222
Dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A, b.
   
 
 0.927
LOC103478814
Protein kinase domain-containing protein.
   
 
 0.927
ddb1
Damage-specific DNA binding protein 1.
    
 0.905
ercc8
Excision repair cross-complementation group 8.
     
 0.836
cul4b
Cullin 4B; Belongs to the cullin family.
    
 0.818
cul4a
Cullin 4A; Belongs to the cullin family.
    
 0.818
dtl
Denticleless E3 ubiquitin protein ligase homolog (Drosophila).
     
 0.808
dcaf11
DDB1- and CUL4-associated factor 11; May function as a substrate receptor for CUL4-DDB1 E3 ubiquitin-protein ligase complex; Belongs to the WD repeat LEC14B family.
    
 0.741
rbbp4
Retinoblastoma binding protein 4.
     
 0.734
RBBP7
RB binding protein 7, chromatin remodeling factor.
     
 0.734
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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